MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Actinomyces bowdenii
WMus004.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 457
bases: 3,191,231 bps
CDS: 2,590
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 56
misc RNA:
Total features: 2,650
Total number of protein coding genes annotated/found:
2,590
Display
20
50
100
All items per page
Items 1 - 20
🡆
click arrow to navigate by page or
of 130 pages
Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5001|JADGKF010000067.1
SEQF5001_02211
Genome Viewer
NA
AA
816/272
169-984
tRNA pseudouridine synthase A
SEQF5001|JADGKF010000067.1
SEQF5001_02212
Genome Viewer
NA
AA
444/148
1331-1774
50S ribosomal protein L13
SEQF5001|JADGKF010000067.1
SEQF5001_02213
Genome Viewer
NA
AA
495/165
1817-2311
hypothetical protein
SEQF5001|JADGKF010000067.1
SEQF5001_02214
Genome Viewer
NA
AA
1359/453
2615-3973
Phosphoglucosamine mutase
SEQF5001|JADGKF010000067.1
SEQF5001_02215
Genome Viewer
NA
AA
483/161
4246-4728
hypothetical protein
SEQF5001|JADGKF010000067.1
SEQF5001_02216
Genome Viewer
NA
AA
390/130
4810-5199
hypothetical protein
SEQF5001|JADGKF010000067.1
SEQF5001_02217
Genome Viewer
NA
AA
465/155
5196-5660
hypothetical protein
SEQF5001|JADGKF010000067.1
SEQF5001_02218
Genome Viewer
NA
AA
1506/502
7388-5883
Dihydrolipoyl dehydrogenase
SEQF5001|JADGKF010000067.1
SEQF5001_02219
Genome Viewer
NA
AA
951/317
8407-7457
Pantothenate kinase
SEQF5001|JADGKF010000067.1
SEQF5001_02220
Genome Viewer
NA
AA
1893/631
8531-10423
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
SEQF5001|JADGKF010000067.1
SEQF5001_02221
Genome Viewer
NA
AA
387/129
10951-10565
Holo-[acyl-carrier-protein] synthase
SEQF5001|JADGKF010000067.1
SEQF5001_02222
Genome Viewer
NA
AA
1629/543
11050-12678
Bifunctional NAD(P)H-hydrate repair enzyme Nnr
SEQF5001|JADGKF010000312.1
SEQF5001_01558
Genome Viewer
NA
AA
1566/522
2028-463
ATP-dependent RNA helicase HrpB
SEQF5001|JADGKF010000182.1
SEQF5001_00765
Genome Viewer
NA
AA
1110/370
249-1358
Heat-inducible transcription repressor HrcA
SEQF5001|JADGKF010000182.1
SEQF5001_00766
Genome Viewer
NA
AA
1122/374
1410-2531
Chaperone protein DnaJ 2
SEQF5001|JADGKF010000182.1
SEQF5001_00767
Genome Viewer
NA
AA
786/262
3383-2598
Pyridoxal phosphate homeostasis protein
SEQF5001|JADGKF010000182.1
SEQF5001_00768
Genome Viewer
NA
AA
807/269
3547-4353
Ribosomal RNA small subunit methyltransferase E
SEQF5001|JADGKF010000182.1
SEQF5001_00769
Genome Viewer
NA
AA
1569/523
5986-4418
hypothetical protein
SEQF5001|JADGKF010000348.1
SEQF5001_01656
Genome Viewer
NA
AA
231/77
235-5
hypothetical protein
SEQF5001|JADGKF010000348.1
SEQF5001_01657
Genome Viewer
NA
AA
702/234
1116-415
hypothetical protein
Items 1 - 20
🡆
click arrow to navigate by page or
of 130 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by